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Ymir
.9
Fast\C++toolforcomputationofassemblingprobabilities,statisticalinferenceofassemblingstatisticalmodelandgenerationofartificialsequencesofT-cellreceptorsdata.
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Ymir
.9
Fast\C++toolforcomputationofassemblingprobabilities,statisticalinferenceofassemblingstatisticalmodelandgenerationofartificialsequencesofT-cellreceptorsdata.
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This is the complete list of members for ymir::NoGapAlignmentVector, including all inherited members.
| _data (defined in ymir::AlignmentVectorBase) | ymir::AlignmentVectorBase | protected |
| _events | ymir::AlignmentVectorBase | protected |
| _starts (defined in ymir::AlignmentVectorBase) | ymir::AlignmentVectorBase | protected |
| addAlignment(seg_index_t id, seq_len_t p_start, seq_len_t t_start, seq_len_t size) | ymir::NoGapAlignmentVector | inline |
| addAlignment(seg_index_t id, seq_len_t p_start, seq_len_t t_start, const events_storage_t &vec) (defined in ymir::NoGapAlignmentVector) | ymir::NoGapAlignmentVector | inline |
| AlignmentVectorBase() (defined in ymir::AlignmentVectorBase) | ymir::AlignmentVectorBase | inline |
| clear() (defined in ymir::AlignmentVectorBase) | ymir::AlignmentVectorBase | inline |
| default_events_reserve_size (defined in ymir::AlignmentVectorBase) | ymir::AlignmentVectorBase | static |
| default_start_reserve_size (defined in ymir::AlignmentVectorBase) | ymir::AlignmentVectorBase | static |
| events_storage_t typedef (defined in ymir::AlignmentVectorBase) | ymir::AlignmentVectorBase | |
| extend(const AlignmentVectorBase &other) (defined in ymir::AlignmentVectorBase) | ymir::AlignmentVectorBase | inline |
| finish() (defined in ymir::AlignmentVectorBase) | ymir::AlignmentVectorBase | inline |
| id(seq_len_t i) const (defined in ymir::AlignmentVectorBase) | ymir::AlignmentVectorBase | inline |
| isMismatch(seq_len_t i, seq_len_t j) const (defined in ymir::NoGapAlignmentVector) | ymir::NoGapAlignmentVector | inline |
| len(seq_len_t i) const (defined in ymir::AlignmentVectorBase) | ymir::AlignmentVectorBase | inline |
| NoGapAlignmentVector() (defined in ymir::NoGapAlignmentVector) | ymir::NoGapAlignmentVector | inline |
| numMismatches(seq_len_t i, seq_len_t start, seq_len_t end) const (defined in ymir::NoGapAlignmentVector) | ymir::NoGapAlignmentVector | inline |
| operator!=(const AlignmentVectorBase &other) (defined in ymir::AlignmentVectorBase) | ymir::AlignmentVectorBase | inline |
| operator==(const AlignmentVectorBase &other) (defined in ymir::AlignmentVectorBase) | ymir::AlignmentVectorBase | inline |
| pattern_start(seq_len_t i) const (defined in ymir::AlignmentVectorBase) | ymir::AlignmentVectorBase | inline |
| size() const (defined in ymir::AlignmentVectorBase) | ymir::AlignmentVectorBase | inline |
| text_start(seq_len_t i) const (defined in ymir::AlignmentVectorBase) | ymir::AlignmentVectorBase | inline |
1.8.11
