Ymir
.9
Fast\C++toolforcomputationofassemblingprobabilities,statisticalinferenceofassemblingstatisticalmodelandgenerationofartificialsequencesofT-cellreceptorsdata.
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This is the complete list of members for ymir::TDMatrixList, including all inherited members.
_colnames (defined in ymir::AbstractTDContainer) | ymir::AbstractTDContainer | protected |
_data (defined in ymir::AbstractTDContainer) | ymir::AbstractTDContainer | protected |
_file_exists (defined in ymir::AbstractTDContainer) | ymir::AbstractTDContainer | protected |
_filepath (defined in ymir::AbstractTDContainer) | ymir::AbstractTDContainer | protected |
_laplace (defined in ymir::AbstractTDContainer) | ymir::AbstractTDContainer | protected |
_metadata (defined in ymir::AbstractTDContainer) | ymir::AbstractTDContainer | protected |
_rownames (defined in ymir::AbstractTDContainer) | ymir::AbstractTDContainer | protected |
_skip_first_column (defined in ymir::AbstractTDContainer) | ymir::AbstractTDContainer | protected |
_type (defined in ymir::AbstractTDContainer) | ymir::AbstractTDContainer | protected |
AbstractTDContainer(CONTAINER_TYPE ctype, bool skip_first_column, prob_t laplace, const std::string &filepath) (defined in ymir::AbstractTDContainer) | ymir::AbstractTDContainer | inline |
AbstractTDContainer() (defined in ymir::AbstractTDContainer) | ymir::AbstractTDContainer | inlineprotected |
addColumnName(const std::string &name) (defined in ymir::AbstractTDContainer) | ymir::AbstractTDContainer | inline |
addDataValue(prob_t value, size_t i=0) (defined in ymir::AbstractTDContainer) | ymir::AbstractTDContainer | inlinevirtual |
addDataVector(const std::vector< prob_t > &vec) (defined in ymir::AbstractTDContainer) | ymir::AbstractTDContainer | inlinevirtual |
addDataVector(std::vector< prob_t >::const_iterator start, std::vector< prob_t >::const_iterator end) (defined in ymir::AbstractTDContainer) | ymir::AbstractTDContainer | inlinevirtual |
addMetadata(seq_len_t data) (defined in ymir::AbstractTDContainer) | ymir::AbstractTDContainer | inline |
addRowName(const std::string &name) (defined in ymir::AbstractTDContainer) | ymir::AbstractTDContainer | inline |
column_names() const (defined in ymir::AbstractTDContainer) | ymir::AbstractTDContainer | inline |
data(size_t i) const (defined in ymir::AbstractTDContainer) | ymir::AbstractTDContainer | inline |
file_exists() const (defined in ymir::AbstractTDContainer) | ymir::AbstractTDContainer | inline |
laplace() const (defined in ymir::AbstractTDContainer) | ymir::AbstractTDContainer | inline |
metadata(size_t i) const (defined in ymir::AbstractTDContainer) | ymir::AbstractTDContainer | inline |
n_columns() const (defined in ymir::AbstractTDContainer) | ymir::AbstractTDContainer | inline |
n_rows() const (defined in ymir::AbstractTDContainer) | ymir::AbstractTDContainer | inline |
read(std::string &err_message) (defined in ymir::TDMatrixList) | ymir::TDMatrixList | inlinevirtual |
row_names() const (defined in ymir::AbstractTDContainer) | ymir::AbstractTDContainer | inline |
TDMatrixList(bool skip_first_column=true, prob_t laplace=0, const std::string &filepath="") (defined in ymir::TDMatrixList) | ymir::TDMatrixList | inline |
TDMatrixList() (defined in ymir::TDMatrixList) | ymir::TDMatrixList | inlineprotected |
type() const (defined in ymir::AbstractTDContainer) | ymir::AbstractTDContainer | inline |
write(const std::string &filepath) (defined in ymir::TDMatrixList) | ymir::TDMatrixList | inlinevirtual |
~AbstractTDContainer() (defined in ymir::AbstractTDContainer) | ymir::AbstractTDContainer | inlinevirtual |
~TDMatrixList() (defined in ymir::TDMatrixList) | ymir::TDMatrixList | inlinevirtual |