ymir::StatisticalInferenceAlgorithm Class Reference

Interface for algorithms for statistical inference of assembling model parameters. More...

#include <statisticalinferencealgorithm.h>

Inheritance diagram for ymir::StatisticalInferenceAlgorithm:

Classes
struct	AlgorithmParameters

Public Member Functions
virtual std::vector< prob_t >	statisticalInference (const ClonesetView &repertoire, ProbabilisticAssemblingModel &model, const AlgorithmParameters &algo_param=AlgorithmParameters(), ErrorMode error_mode=NO_ERRORS) const =0
void	filterOut (const ClonesetView &rep_nonc, const MAAGRepertoire &maag_rep, vector< prob_t > &prob_vec, vector< bool > &good_clonotypes, size_t &removed, size_t &zero_prob, size_t &no_alignments) const

Detailed Description

Interface for algorithms for statistical inference of assembling model parameters.

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The documentation for this class was generated from the following file:

• Ymir/src/statisticalinferencealgorithm.h