Ymir
.9
Fast\C++toolforcomputationofassemblingprobabilities,statisticalinferenceofassemblingstatisticalmodelandgenerationofartificialsequencesofT-cellreceptorsdata.
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This is the complete list of members for ymir::NoGapAlignment, including all inherited members.
_events (defined in ymir::AlignmentBase) | ymir::AlignmentBase | protected |
_len (defined in ymir::AlignmentBase) | ymir::AlignmentBase | protected |
_pattern_start (defined in ymir::AlignmentBase) | ymir::AlignmentBase | protected |
_text_start (defined in ymir::AlignmentBase) | ymir::AlignmentBase | protected |
AlignmentBase(seq_len_t p_start, seq_len_t t_start, events_storage_t &events) (defined in ymir::AlignmentBase) | ymir::AlignmentBase | inline |
AlignmentBase() (defined in ymir::AlignmentBase) | ymir::AlignmentBase | inlineprotected |
AlignmentBase(seq_len_t p_start, seq_len_t t_start, seq_len_t len) (defined in ymir::AlignmentBase) | ymir::AlignmentBase | inlineprotected |
events_storage_t typedef (defined in ymir::AlignmentBase) | ymir::AlignmentBase | |
isMismatch(seq_len_t i) const (defined in ymir::NoGapAlignment) | ymir::NoGapAlignment | inline |
NoGapAlignment(seq_len_t p_start, seq_len_t t_start, events_storage_t &events) (defined in ymir::NoGapAlignment) | ymir::NoGapAlignment | inline |
NoGapAlignment(seq_len_t p_start, seq_len_t t_start, seq_len_t len) (defined in ymir::NoGapAlignment) | ymir::NoGapAlignment | inline |
NoGapAlignment() (defined in ymir::NoGapAlignment) | ymir::NoGapAlignment | inlineprotected |
pattern_start() const (defined in ymir::AlignmentBase) | ymir::AlignmentBase | inline |
size() const (defined in ymir::AlignmentBase) | ymir::AlignmentBase | inline |
text_start() const (defined in ymir::AlignmentBase) | ymir::AlignmentBase | inline |